Parameter List creation for magenta simulation initialisation — param_list_simulation_init

param_list_simulation_init_create creates suitable parameter list for simulation_R for the beginning of a simulation. Also takes an argument for feeding in spatial parameters/data.

param_list_simulation_init_create(
  N = 10000,
  eqSS,
  barcode_list,
  spatial_list,
  housekeeping_list,
  drug_list,
  nmf_list,
  vector_adaptation_list,
  mpl
)

Arguments

N: Population size. Default = 1e4
eqSS: Output of equilibrium_steady_state_create
barcode_list: List of barcode/genetic parameters
spatial_list: Spatial parmeters to come in
housekeeping_list: Housekeeping parameter list from housekeeping_list_create
drug_list: Drug parameter list from drug_list_create
nmf_list: Non malarial fever parameter list from nmf_list_create
vector_adaptation_list: vector adaptation list from vector_adaptation_list
mpl: model parameter list from model_param_list_create