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comp_dens_to_multi_dens()
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Converts infection probability densities to multinomial probabilities |
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cooccurence_test()
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Co-occurence test |
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generate_composition_levels()
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Creates composition types from a vector of probabilities |
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icer
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icer Infection compistion estimation |
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independent()
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Independent model of strain acquisition |
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infection_probabilities()
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Create multinomial distribution for infection probabilities |
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infection_types()
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Creates infection types from infection compositions |
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interf_dmultinom()
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Interference mutlinomial distribution |
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interference()
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Interference model of strain acquisition |
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moi_perms()
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Function to create all moi permutations |
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reorder_within() scale_x_reordered() scale_y_reordered()
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Reorder an x or y axis within facets |