comp_dens_to_multi_dens()
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Converts infection probability densities to multinomial probabilities |
cooccurence_test()
|
Co-occurence test |
generate_composition_levels()
|
Creates composition types from a vector of probabilities |
icer
|
icer Infection compistion estimation |
independent()
|
Independent model of strain acquisition |
infection_probabilities()
|
Create multinomial distribution for infection probabilities |
infection_types()
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Creates infection types from infection compositions |
interf_dmultinom()
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Interference mutlinomial distribution |
interference()
|
Interference model of strain acquisition |
moi_perms()
|
Function to create all moi permutations |
reorder_within() scale_x_reordered() scale_y_reordered()
|
Reorder an x or y axis within facets |