plot_pca_variance.Rd
Plot the variance explained by each component. The number of components shown is controlled by `num_components`, with up to the first 10 componenets shown by default. If less than the requested number of components exist, then all the components will be shown.
plot_pca_variance(pca, num_components = 10)
pca | output of |
---|---|
num_components | numeric for number of maximum components to be shown |
dat <- dummy_data() dat <- filter_misc(dat = dat) dat <- filter_coverage(dat = dat, min_coverage = 2) dat <- melt_mip_data(dat = dat) dat <- impute_mip_data(dat = dat) pca <- pca_mip_data(dat = dat) plot_pca_variance(pca, num_components = 3)